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Publications

Observations on variational and projector Monte Carlo methods

Cornell Affiliated Author(s)
Author
C. Umrigar
Abstract

Variational Monte Carlo and various projector Monte Carlo (PMC) methods are presented in a unified manner. Similarities and differences between the methods and choices made in designing the methods are discussed. Both methods where the Monte Carlo walk is performed in a discrete space and methods where it is performed in a continuous space are considered. It is pointed out that the usual prescription for importance sampling may not be advantageous depending on the particular quantum Monte Carlo method used and the observables of interest, so alternate prescriptions are presented.

Journal
Journal of Chemical Physics
Date Published
Group (Lab)
Cyrus Umrigar Group

Overshoot during phenotypic switching of cancer cell populations

Cornell Affiliated Author(s)
Author
A.L. Sellerio
E. Ciusani
N.B. Ben-Moshe
S. Coco
A. Piccinini
C.R. Myers
J.P. Sethna
C. Giampietro
S. Zapperi
C.A.M. La Porta
Abstract

The dynamics of tumor cell populations is hotly debated: do populations derive hierarchically from a subpopulation of cancer stem cells (CSCs), or are stochastic transitions that mutate differentiated cancer cells to CSCs important? Here we argue that regulation must also be important. We sort human melanoma cells using three distinct cancer stem cell (CSC) markers-CXCR6, CD271 and ABCG2-and observe that the fraction of non-CSC-marked cells first overshoots to a higher level and then returns to the level of unsorted cells.

Journal
Scientific Reports
Date Published
Funding Source
13282993
DMR 1312160
IOS 1127017
1312160
1127017
Research Area
Group (Lab)
Christopher Myers
James Sethna Group

How grow-and-switch gravitropism generates root coiling and root waving growth responses in Medicago truncatula

Cornell Affiliated Author(s)
Author
T.H. Tan
J.L. Silverberg
D.S. Floss
M.J. Harrison
C.L. Henley
Itai Cohen
Abstract

Experimental studies show that plant root morphologies can vary widely from straight gravity-aligned primary roots to fractal-like root architectures. However, the opaqueness of soil makes it difficult to observe how environmental factors modulate these patterns. Here, we combine a transparent hydrogel growth medium with a custom built 3D laser scanner to directly image the morphology of Medicago truncatula primary roots. In our experiments, root growth is obstructed by an inclined plane in the growth medium.

Journal
Proceedings of the National Academy of Sciences of the United States of America
Date Published
Funding Source
DMR-1056662
IOS-1127155
IOS-1353367
Research Area
Group (Lab)
Itai Cohen Group

SiNx layers on nanostructured Si solar cells: Effective for optical absorption and carrier collection

Cornell Affiliated Author(s)
Author
Y. Cho
Eun-Ah Kim
M. Gwon
H.-H. Park
J. Kim
D.-W. Kim
Abstract

We compared nanopatterned Si solar cells with and without SiNx layers. The SiNx layer coating significantly improved the internal quantum efficiency of the nanopatterned cells at long wavelengths as well as short wavelengths, whereas the surface passivation helped carrier collection of flat cells mainly at short wavelengths. The surface nanostructured array enhanced the optical absorption and also concentrated incoming light near the surface in broad wavelength range.

Journal
Applied Physics Letters
Date Published
Group (Lab)

Fluctuating charge order in the cuprates: Spatial anisotropy and feedback from superconductivity

Cornell Affiliated Author(s)
Author
Y. Wang
Debanjan Chowdhury
A.V. Chubukov
Abstract

We analyze the form of static charge susceptibility χ(q) in underdoped cuprates near axial momenta (Q,0) and (0,Q) at which short-range static charge order has been observed. We show that the momentum dependence of χ(q) is anisotropic, and the correlation length in the longitudinal direction is larger than in the transverse direction. We show that correlation lengths in both directions decrease once the system evolves into a superconductor, as a result of the competition between superconductivity and charge order. These results are in agreement with resonant x-ray scattering data [R.

Journal
Physical Review B - Condensed Matter and Materials Physics
Date Published
Group (Lab)
Debanjan Chowdhury Group

Evidence for superconductivity in Li-decorated monolayer graphene

Cornell Affiliated Author(s)
Author
B.M. Ludbrook
G. Levy
P. Nigge
M. Zonno
M. Schneider
D.J. Dvorak
C.N. Veenstra
S. Zhdanovich
D. Wong
P. Dosanjh
C. Straßer
A. Stöhr
S. Forti
C.R. Ast
U. Starke
A. Damascelli
J.C. Davis
Abstract

Monolayer graphene exhibits many spectacular electronic properties, with superconductivity being arguably the most notable exception. It was theoretically proposed that superconductivity might be induced by enhancing the electron-phonon coupling through the decoration of graphene with an alkali adatom superlattice [Profeta G, Calandra M, Mauri F (2012) Nat Phys 8(2): 131-134]. Although experiments have shown an adatom-induced enhancement of the electron-phonon coupling, superconductivity has never been observed.

Journal
Proceedings of the National Academy of Sciences of the United States of America
Date Published
Group (Lab)
J.C. Seamus Davis Group

Glass-to-cryogenic-liquid transitions in aqueous solutions suggested by crack healing

Cornell Affiliated Author(s)
Author
C.U. Kim
M.W. Tate
Sol Gruner
Abstract

Observation of theorized glass-to-liquid transitions between lowdensity amorphous (LDA) and high-density amorphous (HDA) water states had been stymied by rapid crystallization below the homogeneous water nucleation temperature (∼235 K at 0.1 MPa). We report optical and X-ray observations suggestive of glass-toliquid transitions in these states. Crack healing, indicative of liquid, occurs when LDA ice transforms to cubic ice at 160 K, and when HDA ice transforms to the LDA state at temperatures as low as 120 K.

Journal
Proceedings of the National Academy of Sciences of the United States of America
Date Published
Group (Lab)
Sol M. Gruner Group

Transfer printing of CVD graphene FETs on patterned substrates

Cornell Affiliated Author(s)
Author
T.S. Abhilash
R. De Alba
N. Zhelev
H.G. Craighead
J.M. Parpia
Abstract

We describe a simple and scalable method for the transfer of CVD graphene for the fabrication of field effect transistors. This is a dry process that uses a modified RCA-cleaning step to improve the surface quality. In contrast to conventional fabrication routes where lithographic steps are performed after the transfer, here graphene is transferred to a pre-patterned substrate. The resulting FET devices display nearly zero Dirac voltage, and the contact resistance between the graphene and metal contacts is on the order of 910 ± 340 Ω μm.

Journal
Nanoscale
Date Published
Funding Source
DMR1202991
1120296
1202991
Group (Lab)
Jeevak Parpia Group

Erratum: Fragile charge order in the nonsuperconducting ground state of the underdoped high-temperature superconductors (Proceedings of the National Academy of Sciences of the United States of America (2015) 112 (9568–9572) DOI: 10.1073/pnas.1504164112)

Cornell Affiliated Author(s)
Author
B.S. Tan
N. Harrison
Z. Zhu
Fedor Balakirev
B.J. Ramshaw
A. Srivastava
S.A. Sabok
B. Dabrowski
G.G. Lonzarich
Suchitra Sebastian
Abstract

The authors note that the author name S. A. Sabok should instead appear as S. A. Sabok-Sayr. The corrected author line appears below. The online version has been corrected. © 2018 National Academy of Sciences. All Rights Reserved.

Journal
Proceedings of the National Academy of Sciences of the United States of America
Date Published
Group (Lab)
Brad Ramshaw Group

Geometrically controlled snapping transitions in shells with curved creases

Cornell Affiliated Author(s)
Author
N.P. Bende
A.A. Evans
S. Innes-Gold
L.A. Marin
Itai Cohen
R.C. Hayward
C.D. Santangelo
Abstract

Curvature and mechanics are intimately connected for thin materials, and this coupling between geometry and physical properties is readily seen in folded structures from intestinal villi and pollen grains to wrinkled membranes and programmable metamaterials. While the well-known rules and mechanisms behind folding a flat surface have been used to create deployable structures and shape transformable materials, folding of curved shells is still not fundamentally understood.

Journal
Proceedings of the National Academy of Sciences of the United States of America
Date Published
Funding Source
0820506
1240441
Group (Lab)
Itai Cohen Group