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Publications

Spectroscopic fingerprint of phase-incoherent superconductivity in the underdoped Bi2Sr2CaCu2O8+δ

Cornell Affiliated Author(s)
Author
J. Lee
K. Fujita
A.R. Schmidt
C.K. Kim
H. Eisaki
S. Uchida
J.C. Davis
Abstract

A possible explanation for the existence of the cuprate "pseudogap" state is that it is a d-wave superconductor without quantum phase rigidity. Transport and thermodynamic studies provide compelling evidence that supports this proposal, but few spectroscopic explorations of it have been made. One spectroscopic signature of d-wave superconductivity is the particle-hole symmetric "octet" of dispersive Bogoliubov quasiparticle interference modulations. Here we report on this octet's evolution from low temperatures to well into the underdoped pseudogap regime.

Journal
Science
Date Published
Group (Lab)
J.C. Seamus Davis Group

Reconstruction algorithm for single-particle diffraction imaging experiments

Cornell Affiliated Author(s)
Author
N.-T.D. Loh
V. Elser
Abstract

We introduce the EMC algorithm for reconstructing a particle's three-dimensional (3D) diffraction intensity from very many photon shot-noise limited two-dimensional measurements, when the particle orientation in each measurement is unknown. The algorithm combines a maximization step (M) of the intensity's likelihood function, with expansion (E) and compression (C) steps that map the 3D intensity model to a redundant tomographic representation and back again.

Journal
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
Date Published
Group (Lab)
Veit Elser Group

Elastic effects of vacancies in strontium titanate: Short- and long-range strain fields, elastic dipole tensors, and chemical strain

Cornell Affiliated Author(s)
Author
D.A. Freedman
D. Roundy
Tomas Arias
Abstract

We present a study of the local strain effects associated with vacancy defects in strontium titanate and report the first calculations of elastic dipole tensors and chemical strains for point defects in perovskites. The combination of local and long-range results will enable determination of x-ray scattering signatures that can be compared with experiments. We find that the oxygen vacancy possesses a special property-a highly anisotropic elastic dipole tensor which almost vanishes upon averaging over all possible defect orientations.

Journal
Physical Review B - Condensed Matter and Materials Physics
Date Published
Funding Source
0520404
Group (Lab)
Tomas Arias Group

X-ray absorption spectra reveal the inapplicability of the single-band Hubbard model to overdoped cuprate superconductors

Cornell Affiliated Author(s)
Author
D.C. Peets
D.G. Hawthorn
K.M. Shen
Y.-J. Kim
D.S. Ellis
H. Zhang
S. Komiya
Y. Ando
G.A. Sawatzky
R. Liang
D.A. Bonn
W.N. Hardy
Abstract

X-ray absorption spectra on the overdoped high-temperature superconductors Tl2Ba2CuO6+δ and La2-xSrxCuO4±δ reveal a striking departure in the electronic structure from that of the underdoped regime. The upper Hubbard band, identified with strong correlation effects, is not observed on the oxygen K edge, while the lowest-energy prepeak gains less intensity than expected above p∼0.21.

Journal
Physical Review Letters
Date Published
Group (Lab)
Kyle Shen Group

Fractional vortex lattice structures in spin-triplet superconductors

Cornell Affiliated Author(s)
Author
S.B. Chung
D.F. Agterberg
Eun-Ah Kim
Abstract

Motivated by recent interest in spin-triplet superconductors, we investigate the vortex lattice structures for this class of unconventional superconductors. We discuss how the order parameter symmetry can give rise to U(1) × U(1) symmetry in the same sense as in spinor condensates, making half-quantum vortices (HQVs) topologically stable. We then calculate the vortex lattice structure of HQVs, with particular attention on the roles of the crystalline lattice, the Zeeman coupling and Meissner screening, all absent in spinor condensates.

Journal
New Journal of Physics
Date Published
Group (Lab)

Using DNA mechanics to predict in vitro nucleosome positions and formation energies

Cornell Affiliated Author(s)
Author
A.V. Morozov
K. Fortney
D.A. Gaykalova
V.M. Studitsky
J. Widom
E.D. Siggia
Abstract

In eukaryotic genomes, nucleosomes function to compact DNA and to regulate access to it both by simple physical occlusion and by providing the substrate for numerous covalent epigenetic tags. While competition with other DNA-binding factors and action of chromatin remodeling enzymes significantly affect nucleosome formation in vivo, nucleosome positions in vitro are determined by steric exclusion and sequence alone.

Journal
Nucleic Acids Research
Date Published
Funding Source
0549593
DMR-0129848
R01 GM054692
R01 GM058617
R01 GM58650
R01HG004708
Research Area

Multiple nuclear polarization states in a double quantum dot

Cornell Affiliated Author(s)
Author
J. Danon
I.T. Vink
F.H.L. Koppens
K.C. Nowack
L.M.K. Vandersypen
Y.V. Nazarov
Abstract

We observe multiple stable states of nuclear polarization and nuclear self-tuning over a large range of fields in a double quantum dot under conditions of electron spin resonance. The observations can be understood within an elaborated theoretical rate equation model for the polarization in each of the dots, in the limit of strong driving. This model also captures unusual features of the data, such as fast switching and a "wrong" sign of polarization. The results reported enable applications of this polarization effect, including accurate manipulation and control of nuclear fields.

Journal
Physical Review Letters
Date Published
Group (Lab)
Katja Nowack Group

Stochastic kinetics of ribosomes: Single motor properties and collective behavior

Cornell Affiliated Author(s)
Author
Debanjan Chowdhury
A. Garai
Debanjan Chowdhury
T.V. Ramakrishnan
Abstract

Syntheses of protein molecules in a cell are carried out by ribosomes. A ribosome can be regarded as a molecular motor which utilizes the input chemical energy to move on a messenger RNA (mRNA) track that also serves as a template for the polymerization of the corresponding protein. The forward movement, however, is characterized by an alternating sequence of translocation and pause.

Journal
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
Date Published
Group (Lab)
Debanjan Chowdhury Group