Publications
How Cooper pairs vanish approaching the Mott insulator in Bi 2Sr2CaCu2O8+δ
The antiferromagnetic ground state of copper oxide Mott insulators is achieved by localizing an electron at each copper atom in real space (r-space). Removing a small fraction of these electrons (hole doping) transforms this system into a superconducting fluid of delocalized Cooper pairs in momentum space (k-space). During this transformation, two distinctive classes of electronic excitations appear.
Mapping the depth dependence of shear properties in articular cartilage
Determining the depth dependence of the shear properties of articular cartilage is essential for understanding the structure-function relation in this tissue. Here, we measured spatial variations in the shear modulus G of bovine articular cartilage using a novel technique that combines shear testing, confocal imaging and force measurement.
Restricted dislocation motion in crystals of colloidal dimer particles
At high area fractions, monolayers of colloidal dimer particles form a degenerate crystal (DC) structure in which the particle lobes occupy triangular lattice sites while the particles are oriented randomly along any of the three lattice directions. We report that dislocation glide in DCs is blocked by certain particle orientations. The mean number of lattice constants between such obstacles is Z̄exp=4.6±0.2 in experimentally observed DC grains and Z̄sim=6.18±0.01 in simulated monocrystalline DCs.
Sloppiness, robustness, and evolvability in systems biology
The functioning of many biochemical networks is often robust - remarkably stable under changes in external conditions and internal reaction parameters. Much recent work on robustness and evolvability has focused on the structure of neutral spaces, in which system behavior remains invariant to mutations. Recently we have shown that the collective behavior of multiparameter models is most often sloppy: insensitive to changes except along a few 'stiff' combinations of parameters, with an enormous sloppy neutral subspace.
Positive feedback of G1 cyclins ensures coherent cell cycle entry
In budding yeast, Saccharomyces cerevisiae, the Start checkpoint integrates multiple internal and external signals into an all-or-none decision to enter the cell cycle. Here we show that Start behaves like a switch due to systems-level feedback in the regulatory network. In contrast to current models proposing a linear cascade of Start activation, transcriptional positive feedback of the G1 cyclins Cln1 and Cln2 induces the near-simultaneous expression of the ∼200-gene G1/S regulon. Nuclear Cln2 drives coherent regulon expression, whereas cytoplasmic Cln2 drives efficient budding.
Size and frequency dependent gas damping of nanomechanical resonators
We examine size and frequency dependent gas damping of nanobeam resonators. We find an optimal beam width that maximizes the quality factor at atmospheric pressure, balancing the dissipation that scales with surface-to-volume ratio and dominates at small widths, against the interaction with the underlying substrate via the air that dominates the behavior of the wider devices. This latter interaction is found to affect the Knudsen number corresponding to a transition out of the molecular damping regime.
Quantum Monte Carlo algorithms for electronic structure at the petascale; The Endstation project
Over the past two decades, continuum quantum Monte Carlo (QMC) has proved to be an invaluable tool for predicting of the properties of matter from fundamental principles. By solving the Schrödinger equation through a stochastic projection, it achieves the greatest accuracy and reliability of methods available for physical systems containing more than a few quantum particles. QMC enjoys scaling favorable to quantum chemical methods, with a computational effort which grows with the second or third power of system size.
A case study of evolutionary computation of biochemical adaptation
Simulations of evolution have a long history, but their relation to biology is questioned because of the perceived contingency of evolution. Here we provide an example of a biological process, adaptation, where simulations are argued to approach closer to biology. Adaptation is a common feature of sensory systems, and a plausible component of other biochemical networks because it rescales upstream signals to facilitate downstream processing.
Spin echo of a single electron spin in a quantum dot
We report a measurement of the spin-echo decay of a single electron spin confined in a semiconductor quantum dot. When we tip the spin in the transverse plane via a magnetic field burst, it dephases in 37 ns due to the Larmor precession around a random effective field from the nuclear spins in the host material. We reverse this dephasing to a large extent via a spin-echo pulse, and find a spin-echo decay time of about 0.5μs at 70 mT. These results are in the range of theoretical predictions of the electron spin coherence time governed by the electron-nuclear dynamics.
Theory of the nodal nematic quantum phase transition in superconductors
We study the character of an Ising nematic quantum phase transition deep inside a d -wave superconducting state with nodal quasiparticles in a two-dimensional tetragonal crystal. We find that, within a 1/N expansion, the transition is continuous. To leading order in 1/N, quantum fluctuations enhance the dispersion anisotropy of the nodal excitations and cause strong scattering, which critically broadens the quasiparticle (qp) peaks in the spectral function, except in a narrow wedge in momentum space near the Fermi surface where the qps remain sharp.