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Publications

Discontinuities at the DNA supercoiling transition

Cornell Affiliated Author(s)
Author
B.C. Daniels
S. Forth
M.Y. Sheinin
M.D. Wang
J.P. Sethna
Abstract

While slowly turning the ends of a single molecule of DNA at constant applied force, a discontinuity was recently observed at the supercoiling transition when a small plectoneme is suddenly formed. This can be understood as an abrupt transition into a state in which stretched and plectonemic DNA coexist. We argue that there should be discontinuities in both the extension and the torque at the transition and provide experimental evidence for both.

Journal
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
Date Published
Research Area
Group (Lab)
James Sethna Group
Michelle Wang Group

Locking electron spins into magnetic resonance by electron-nuclear feedback

Cornell Affiliated Author(s)
Author
I.T. Vink
K.C. Nowack
F.H.L. Koppens
J. Danon
Y.V. Nazarov
L.M.K. Vandersypen
Abstract

Quantum information processing requires accurate coherent control of quantum-mechanical two-level systems, but is hampered in practice by their coupling to an uncontrolled environment. For electron spins in III-V quantum dots, the random environment is mostly given by the nuclear spins in the quantum-dot host material; they collectively act on the electron spin through the hyperfine interaction, much like a random magnetic field. Here we show that the same hyperfine interaction can be harnessed such that partial control of the normally uncontrolled environment becomes possible.

Journal
Nature Physics
Date Published
Group (Lab)
Katja Nowack Group

Noise limits on reconstructing diffraction signals from random tomographs

Cornell Affiliated Author(s)
Author
V. Elser
Abstract

An information theoretic criterion for the feasibility of reconstructing diffraction signals from noisy tomographs, when the positions of the tomographs within the signal are unknown, is derived. For shot-noise limited data, the number of detected photons per tomograph for successful reconstruction is much smaller than previously believed necessary, growing only logarithmically with the number of contrast elements of the diffracting object.

Journal
IEEE Transactions on Information Theory
Date Published
Funding Source
DE-FG02-05ER46198
Group (Lab)
Veit Elser Group

Slow cooling of protein crystals

Cornell Affiliated Author(s)
Author
M. Warkentin
R.E. Thorne
Abstract

Cryoprotectant-free thaumatin crystals have been cooled from 300 to 100 K at a rate of 0.1 K s-1 - 103-104 times slower than in conventional flash cooling - while continuously collecting X-ray diffraction data, so as to follow the evolution of protein lattice and solvent properties during cooling. Diffraction patterns show no evidence of crystalline ice at any temperature.

Journal
Journal of Applied Crystallography
Date Published
Research Area
Group (Lab)
Robert Thorne Group

What kind of data do we expect in single-molecule imaging experiments and how do we process it?

Cornell Affiliated Author(s)
Author
V. Elser
D.N.-T. Loh
Abstract

The proposed experiments to image single molecules with x-ray free-electron lasers present an unprecedented challenge in data processing. We describe for non-experts the computational tasks and some recent progress in solving them. © 2009 OSA.

Conference Name
.
Date Published
Group (Lab)
Veit Elser Group

Excited states of methylene from quantum Monte Carlo

Cornell Affiliated Author(s)
Author
Paul Zimmerman
Julien Toulouse
Zhiyong Zhang
Charles Musgrave
C. Umrigar
Abstract

The ground and lowest three adiabatic excited states of methylene are computed using the variational Monte Carlo and diffusion Monte Carlo (DMC) methods using progressively larger Jastrow-Slater multideterminant complete active space (CAS) wave functions. The highest of these states has the same symmetry, A1 1, as the first excited state.

Journal
Journal of Chemical Physics
Date Published
Funding Source
EAR-0530813
DE-FG02-07ER46365
Group (Lab)
Cyrus Umrigar Group

Piezoresistive transduction in multilayer polycrystalline silicon resonators

Cornell Affiliated Author(s)
Author
J.D. Cross
B.R. Ilic
M.K. Zalalutdinov
W. Zhou
J.W. Baldwin
B.H. Houston
H.G. Craighead
J.M. Parpia
Abstract

We demonstrate piezoresistive transduction of mechanical motion from out-of-plane flexural micromechanical resonators made from stacked thin films. The resonators are fabricated from two highly doped polycrystalline silicon layers separated by an interlayer dielectric. We examine two interlayer materials: thermal silicon dioxide and stoichiometric silicon nitride. We show that via one-time dielectric breakdown, the film stack functions as a vertical piezoresistor effectively transducing the motion of the resonators.

Journal
Applied Physics Letters
Date Published
Group (Lab)
Jeevak Parpia Group

Extremely efficient multiple electron-hole pair generation in carbon nanotube photodiodes

Cornell Affiliated Author(s)
Author
N.M. Gabor
Z. Zhong
K. Bosnick
J. Park
P.L. McEuen
Abstract

We observed highly efficient generation of electron-hole pairs due to impact excitation in single-walled carbon nanotube p-n junction photodiodes. Optical excitation into the second electronic subband E22 leads to striking photocurrent steps in the device I-VSD characteristics that occur at voltage intervals of the band-gap energy EGAP/e. Spatially and spectrally resolved photocurrent combined with temperature-dependent studies suggest that these steps result from efficient generation of multiple electron-hole pairs from a single hot E22 carrier.

Journal
Science
Date Published
Group (Lab)
Paul McEuen Group

Flapping wing flight can save aerodynamic power compared to steady flight

Cornell Affiliated Author(s)
Author
U. Pesavento
Z.J. Wang
Abstract

Flapping flight is more maneuverable than steady flight. It is debated whether this advantage is necessarily accompanied by a trade-off in the flight efficiency. Here we ask if any flapping motion exists that is aerodynamically more efficient than the optimal steady motion. We solve the Navier-Stokes equation governing the fluid dynamics around a 2D flapping wing, and determine the minimal aerodynamic power needed to support a specified weight.

Journal
Physical Review Letters
Date Published
Research Area
Group (Lab)
Z. Jane Wang Group

Free-standing epitaxial graphene

Cornell Affiliated Author(s)
Author
S. Shivaraman
R.A. Barton
X. Yu
J. Alden
L. Herman
M.S.V. Chandrashekhar
J. Park
P.L. McEuen
J.M. Parpia
H.G. Craighead
M.G. Spencer
Abstract

We report on a method to produce free-standing graphene sheets from epitaxial graphene on silicon carbide (SiC) substrate. Doubly clamped nanomechanical resonators with lengths up to 20 μm were patterned using this technique and their resonant motion was actuated and detected optically. Resonance frequencies of the order of tens of megahertz were measured for most devices, indicating that the resonators are much stiffer than expected for beams under no tension.

Journal
Nano Letters
Date Published
Group (Lab)
Jeevak Parpia Group
Paul McEuen Group