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Publications

STRAINS: A big data method for classifying cellular response to stimuli at the tissue scale

Author
J. Zheng
T.W. Jackson
L.A. Fortier
L.J. Bonassar
M.L. Delco
Itai Cohen
Abstract

Cellular response to stimulation governs tissue scale processes ranging from growth and development to maintaining tissue health and initiating disease. To determine how cells coordinate their response to such stimuli, it is necessary to simultaneously track and measure the spatiotemporal distribution of their behaviors throughout the tissue. Here, we report on a novel SpatioTemporal Response Analysis IN Situ (STRAINS) tool that uses fluorescent micrographs, cell tracking, and machine learning to measure such behavioral distributions.

Journal
PLoS ONE
Date Published
Funding Source
BMMB-1536463 IC
CMMI-1927197
DMR-1807602
K08AR068470
R01AR071394
R03AR075929
DMR-1719875
Group (Lab)
Itai Cohen Group

Reentrant rigidity percolation in structurally correlated filamentous networks

Cornell Affiliated Author(s)
Author
J. Michel
G. Von Kessel
T.W. Jackson
L.J. Bonassar
Itai Cohen
M. Das
Abstract

Many biological tissues feature a heterogeneous network of fibers whose tensile and bending rigidity contribute substantially to these tissues' elastic properties. Rigidity percolation has emerged as an important paradigm for relating these filamentous tissues' mechanics to the concentrations of their constituents. Past studies have generally considered tuning of networks by spatially homogeneous variation in concentration, while ignoring structural correlation.

Journal
Physical Review Research
Date Published
Funding Source
DMR-1807602
DMR-1808026
DMR-2118449
Research Area
Group (Lab)
Itai Cohen Group

Universal scaling for disordered viscoelastic matter near the onset of rigidity

Author
Danilo Liarte
Stephen Thornton
Eric Schwen
Itai Cohen
Debanjan Chowdhury
James Sethna
Abstract

The onset of rigidity in interacting liquids, as they undergo a transition to a disordered solid, is associated with a rearrangement of the low-frequency vibrational spectrum. In this Letter, we derive scaling forms for the singular dynamical response of disordered viscoelastic networks near both jamming and rigidity percolation. Using effective-medium theory, we extract critical exponents, invariant scaling combinations, and analytical formulas for universal scaling functions near these transitions.

Journal
Physical Review E
Date Published
Funding Source
DMR-1719490
2010118
1509308
2016/01343-7
2021/14285-3
Group (Lab)
Debanjan Chowdhury Group
Itai Cohen Group
James Sethna Group

Microscopic robots with onboard digital control

Cornell Affiliated Author(s)
Author
M.F. Reynolds
A.J. Cortese
Q. Liu
Z. Zheng
W. Wang
S.L. Norris
S. Lee
M.Z. Miskin
A.C. Molnar
Itai Cohen
P.L. McEuen
Abstract

Autonomous robots-systems where mechanical actuators are guided through a series of states by information processing units to perform a predesigned function-are expected to revolutionize everything from health care to transportation. Microscopic robots are poised for a similar revolution in fields from medicine to environmental remediation. A key hurdle to developing these microscopic robots is the integration of information systems, particularly electronics fabricated at commercial foundries, with microactuators.

Journal
Science Robotics
Date Published
Group (Lab)
Itai Cohen Group
Paul McEuen Group

The Role of Buckling Instabilities in the Global and Local Mechanical Response in Porous Collagen Scaffolds

Cornell Affiliated Author(s)
Author
B. Kim
J.M. Middendorf
N. Diamantides
C. Dugopolski
S. Kennedy
E. Blahut
Itai Cohen
N. Bouklas
L.J. Bonassar
Abstract

Background: Porous polymer scaffolds are commonly used for regenerative medicine and tissue-engineered therapies in the repair and regeneration of structural tissues which require sufficient mechanical integrity to resist loading prior to tissue ingrowth. Objective: Investigate the connection between scaffold architecture and mechanical response of collagen scaffolds used in human tissue-engineered cartilage. Methods: We performed multi-scale mechanical analysis on two types of porous collagen scaffolds with honeycomb and sponge architectures.

Journal
Experimental Mechanics
Date Published
Funding Source
CMMI 2129776
Research Area
Group (Lab)
Itai Cohen Group

Programming interactions in magnetic handshake materials

Cornell Affiliated Author(s)
Author
C.X. Du
H.A. Zhang
T.G. Pearson
J. Ng
P.L. McEuen
Itai Cohen
M.P. Brenner
Abstract

The ability to rapidly manufacture building blocks with specific binding interactions is a key aspect of programmable assembly. Recent developments in DNA nanotechnology and colloidal particle synthesis have significantly advanced our ability to create particle sets with programmable interactions, based on DNA or shape complementarity. The increasing miniaturization underlying magnetic storage offers a new path for engineering programmable components for self assembly, by printing magnetic dipole patterns on substrates using nanotechnology.

Journal
Soft Matter
Date Published
Funding Source
DMR-1921567
DMR-1921619
137070-20834
N00014-17-1-3029
DMR-1719875
Research Area
Group (Lab)
J.C. Seamus Davis Group
Paul McEuen Group

Cilia metasurfaces for electronically programmable microfluidic manipulation

Cornell Affiliated Author(s)
Author
W. Wang
Q. Liu
I. Tanasijevic
M.F. Reynolds
A.J. Cortese
M.Z. Miskin
M.C. Cao
D.A. Muller
A.C. Molnar
E. Lauga
P.L. McEuen
Itai Cohen
Abstract

Cilial pumping is a powerful strategy used by biological organisms to control and manipulate fluids at the microscale. However, despite numerous recent advances in optically, magnetically and electrically driven actuation, development of an engineered cilial platform with the potential for applications has remained difficult to realize1–6. Here we report on active metasurfaces of electronically actuated artificial cilia that can create arbitrary flow patterns in liquids near a surface.

Journal
Nature
Date Published
Funding Source
EFMA-1935252
NNCI-2025233
ARO W911NF-18-1-0032
DMR-1719875
682754
FA9550-16-1-0031
Group (Lab)
Itai Cohen Group
Paul McEuen Group

Structural origins of cartilage shear mechanics

Cornell Affiliated Author(s)
Author
T.W. Jackson
J. Michel
P. Lwin
L.A. Fortier
M. Das
L.J. Bonassar
Itai Cohen
Abstract

Articular cartilage is a remarkable material able to sustain millions of loading cycles over decades of use outperforming any synthetic substitute. Crucially, how extracellular matrix constituents alter mechanical performance, particularly in shear, remains poorly understood. Here, we present experiments and theory in support of a rigidity percolation framework that quantitatively describes the structural origins of cartilage's shear properties and how they arise from the mechanical interdependence of the collagen and aggrecan networks making up its extracellular matrix.

Journal
Science Advances
Date Published
Funding Source
BMMB-1536463
CBET-1604712
CMMI 1927197
DMR-1807602
DMR-1808026
DMR-1719875
R01AR071394
Group (Lab)
Itai Cohen Group

Re-entrant transition as a bridge of broken ergodicity in confined monolayers of hexagonal prisms and cylinders

Cornell Affiliated Author(s)
Author
B.P. Prajwal
J.-Y. Huang
M. Ramaswamy
A.D. Stroock
T. Hanrath
Itai Cohen
F.A. Escobedo
Abstract

The entropy-driven monolayer assembly of hexagonal prisms and cylinders was studied under hard slit confinement. At the conditions investigated, the particles have two distinct and dynamically disconnected rotational states: unflipped and flipped, depending on whether their circular/hexagonal face is parallel or perpendicular to the wall plane. Importantly, these two rotational states cast distinct projection areas over the wall plane that favor either hexagonal or tetragonal packing.

Journal
Journal of Colloid and Interface Science
Date Published
Funding Source
CBET-1907369
CBET-2010118
NNCI-2025233
Group (Lab)
Itai Cohen Group

Rigidity and fracture of biopolymer double networks

Cornell Affiliated Author(s)
Author
P. Lwin
A. Sindermann
L. Sutter
Wyse Jackson
L.J. Bonassar
Itai Cohen
M. Das
Abstract

Tunable mechanics and fracture resistance are hallmarks of biological tissues whose properties arise from extracellular matrices comprised of double networks. To elucidate the origin of these desired properties, we study the shear modulus and fracture properties of a rigidly percolating double network model comprised of a primary network of stiff fibers and a secondary network of flexible fibers.

Journal
Soft Matter
Date Published
Funding Source
CBET-1604712
CMMI-1536463
DMR-1807602
DMR-1808026
Research Area
Group (Lab)
Itai Cohen Group