Skip to main content

Publications

The OpenKIM processing pipeline: A cloud-based automatic material property computation engine

Cornell Affiliated Author(s)
Author
D.S. Karls
M. Bierbaum
A.A. Alemi
R.S. Elliott
J.P. Sethna
E.B. Tadmor
Abstract

The Open Knowledgebase of Interatomic Models (OpenKIM) is a framework intended to facilitate access to standardized implementations of interatomic models for molecular simulations along with computational protocols to evaluate them. These protocols include tests to compute material properties predicted by models and verification checks to assess their coding integrity.

Journal
Journal of Chemical Physics
Date Published
Funding Source
1834251
1834332
Research Area
Group (Lab)
James Sethna Group

Visualizing probabilistic models in Minkowski space with intensive symmetrized Kullback-Leibler embedding

Cornell Affiliated Author(s)
Author
H.K. Teoh
K.N. Quinn
J. Kent-Dobias
C.B. Clement
Q. Xu
J.P. Sethna
Abstract

We show that the predicted probability distributions for any N-parameter statistical model taking the form of an exponential family can be explicitly and analytically embedded isometrically in a N+N-dimensional Minkowski space. That is, the model predictions can be visualized as control parameters are varied, preserving the natural distance between probability distributions. All pairwise distances between model instances are given by the symmetrized Kullback-Leibler divergence.

Journal
Physical Review Research
Date Published
Funding Source
1719490
Group (Lab)
James Sethna Group

Unusual scaling for two-dimensional avalanches: Curing the faceting and scaling in the lower critical dimension

Cornell Affiliated Author(s)
Author
L.X. Hayden
A. Raju
J.P. Sethna
Abstract

The nonequilibrium random-field Ising model is well studied, yet there are outstanding questions. In two dimensions, power-law scaling approaches fail and the critical disorder is difficult to pin down. Additionally, the presence of faceting on the square lattice creates avalanches that are lattice dependent at small scales. We propose two methods which we find solve these issues. First, we perform large-scale simulations on a Voronoi lattice to mitigate the effects of faceting.

Journal
Physical Review Research
Date Published
Funding Source
1144153
1719490
Group (Lab)
James Sethna Group

Yield Precursor Dislocation Avalanches in Small Crystals: The Irreversibility Transition

Cornell Affiliated Author(s)
Author
X. Ni
H. Zhang
D.B. Liarte
L.W. McFaul
K.A. Dahmen
J.P. Sethna
J.R. Greer
Abstract

The transition from elastic to plastic deformation in crystalline metals shares history dependence and scale-invariant avalanche signature with other nonequilibrium systems under external loading such as colloidal suspensions.

Journal
Physical Review Letters
Date Published
Funding Source
DMR-1719490
CBET 1336634
DESC0016945
DE-FG02-07ER46393
Group (Lab)
James Sethna Group

Visualizing probabilistic models and data with Intensive Principal Component Analysis

Cornell Affiliated Author(s)
Author
K.N. Quinn
C.B. Clement
F. De Bernardis
M.D. Niemack
J.P. Sethna
Abstract

Unsupervised learning makes manifest the underlying structure of data without curated training and specific problem definitions. However, the inference of relationships between data points is frustrated by the “curse of dimensionality†in high dimensions. Inspired by replica theory from statistical mechanics, we consider replicas of the system to tune the dimensionality and take the limit as the number of replicas goes to zero. The result is intensive embedding, which not only is isometric (preserving local distances) but also allows global structure to be more transparently visualized.

Journal
Proceedings of the National Academy of Sciences of the United States of America
Date Published
Funding Source
1719490
AST-1454881
DMR-1312160
DMR-1719490
Group (Lab)
James Sethna Group

Online storage ring optimization using dimension-reduction and genetic algorithms

Cornell Affiliated Author(s)
Author
W.F. Bergan
I.V. Bazarov
C.J.R. Duncan
D.B. Liarte
D.L. Rubin
J.P. Sethna
Abstract

Particle storage rings are a rich application domain for online optimization algorithms. The Cornell Electron Storage Ring (CESR) has hundreds of independently powered magnets, making it a high-dimensional test-problem for algorithmic tuning. We investigate algorithms that restrict the search space to a small number of linear combinations of parameters ("knobs") which contain most of the effect on our chosen objective (the vertical emittance), thus enabling efficient tuning.

Journal
Physical Review Accelerators and Beams
Date Published
Funding Source
DE-SC 0013571
DGE-1650441
OIA-1549132
Group (Lab)
James Sethna Group

Normal Form for Renormalization Groups

Cornell Affiliated Author(s)
Author
A. Raju
C.B. Clement
L.X. Hayden
J.P. Kent-Dobias
D.B. Liarte
D.Z. Rocklin
J.P. Sethna
Abstract

The results of the renormalization group are commonly advertised as the existence of power-law singularities near critical points. The classic predictions are often violated and logarithmic and exponential corrections are treated on a case-by-case basis. We use the mathematics of normal form theory to systematically group these into universality families of seemingly unrelated systems united by common scaling variables. We recover and explain the existing literature and predict the nonlinear generalization for the universal homogeneous scaling functions.

Journal
Physical Review X
Date Published
Funding Source
1308089
1312160
Group (Lab)
James Sethna Group

Chebyshev Approximation and the Global Geometry of Model Predictions

Cornell Affiliated Author(s)
Author
K.N. Quinn
H. Wilber
A. Townsend
J.P. Sethna
Abstract

Complex nonlinear models are typically ill conditioned or sloppy; their predictions are significantly affected by only a small subset of parameter combinations, and parameters are difficult to reconstruct from model behavior. Despite forming an important universality class and arising frequently in practice when performing a nonlinear fit to data, formal and systematic explanations of sloppiness are lacking. By unifying geometric interpretations of sloppiness with Chebyshev approximation theory, we rigorously explain sloppiness as a consequence of model smoothness.

Journal
Physical Review Letters
Date Published
Funding Source
1719490
1818757
Group (Lab)
James Sethna Group

Morphology of renormalization-group flow for the de Almeida-Thouless-Gardner universality class

Cornell Affiliated Author(s)
Author
P. Charbonneau
Y. Hu
A. Raju
J.P. Sethna
S. Yaida
Abstract

A replica-symmetry-breaking phase transition is predicted in a host of disordered media. The criticality of the transition has, however, long been questioned below its upper critical dimension, six, due to the absence of a critical fixed point in the renormalization-group flows at one-loop order. A recent two-loop analysis revealed a possible strong-coupling fixed point, but given the uncontrolled nature of perturbative analysis in the strong-coupling regime, debate persists.

Journal
Physical Review E
Date Published
Funding Source
DMR-1719490
1719490
454937
Research Area
Group (Lab)
James Sethna Group

Cluster representations and the Wolff algorithm in arbitrary external fields

Cornell Affiliated Author(s)
Author
J. Kent-Dobias
J.P. Sethna
Abstract

We introduce a natural way to extend celebrated spin-cluster Monte Carlo algorithms for fast thermal lattice simulations at criticality, such as the Wolff algorithm, to systems in arbitrary fields, be they linear magnetic vector fields or nonlinear anisotropic ones. By generalizing the "ghost spin" representation to one with a "ghost transformation," global invariance to spin symmetry transformations is restored at the cost of an extra degree of freedom which lives in the space of symmetry transformations. The ordinary cluster-building process can then be run on the representation.

Journal
Physical Review E
Date Published
Funding Source
1719490
Group (Lab)
James Sethna Group