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A geometrical perspective on development

Cornell Affiliated Author(s)

Author

A. Raju
E.D. Siggia

Abstract

Cell fate decisions emerge as a consequence of a complex set of gene regulatory networks. Models of these networks are known to have more parameters than data can determine. Recent work, inspired by Waddington's metaphor of a landscape, has instead tried to understand the geometry of gene regulatory networks. Here, we describe recent results on the appropriate mathematical framework for constructing these landscapes. This allows the construction of minimally parameterized models consistent with cell behavior. We review existing examples where geometrical models have been used to fit experimental data on cell fate and describe how spatial interactions between cells can be understood geometrically. © 2023 Japanese Society of Developmental Biologists.

Date Published

Journal

Development Growth and Differentiation

URL

https://www.scopus.com/inward/record.uri?eid=2-s2.0-85160677921&doi=10.1111%2fdgd.12855&partnerID=40&md5=dd234b0fd2dd45bfec4a17513e949b27

DOI

10.1111/dgd.12855

Research Area

Funding Source

2013131

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