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Publications

Adiabatic dynamics in passage across quantum critical lines and gapless phases

Cornell Affiliated Author(s)
Author
Debanjan Chowdhury
U. Divakaran
A. Dutta
Abstract

It is well known that the dynamics of a quantum system is always nonadiabatic in passage through a quantum critical point and the defect density in the final state following a quench shows a power-law scaling with the rate of quenching. However, we propose here a possible situation where the dynamics of a quantum system in passage across quantum critical regions is adiabatic and the defect density decays exponentially.

Journal
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
Date Published
Group (Lab)
Debanjan Chowdhury Group

Stochastic kinetics of ribosomes: Single motor properties and collective behavior

Cornell Affiliated Author(s)
Author
Debanjan Chowdhury
A. Garai
Debanjan Chowdhury
T.V. Ramakrishnan
Abstract

Syntheses of protein molecules in a cell are carried out by ribosomes. A ribosome can be regarded as a molecular motor which utilizes the input chemical energy to move on a messenger RNA (mRNA) track that also serves as a template for the polymerization of the corresponding protein. The forward movement, however, is characterized by an alternating sequence of translocation and pause.

Journal
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
Date Published
Group (Lab)
Debanjan Chowdhury Group

Searching for targets on a model DNA: Effects of inter-segment hopping, detachment, and re-attachment

Cornell Affiliated Author(s)
Author
Debanjan Chowdhury
Abstract

For most of the important processes in DNA metabolism, a protein has to reach a specific binding site on the DNA. The specific binding site may consist of just a few base-pairs while the DNA is usually several millions of base-pairs long. How does the protein search for the target site? What is the most efficient mechanism for a successful search? Motivated by these fundamental questions on intracellular biological processes, we have developed a model for searching a specific site on a model DNA by a single protein.

Journal
International Journal of Modern Physics C
Date Published
Group (Lab)
Debanjan Chowdhury Group